8EB0
RNF216/E2-Ub/Ub transthiolation complex
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
| Synchrotron site | Australian Synchrotron |
| Beamline | MX2 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2021-03-31 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.95372 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 152.545, 70.363, 65.152 |
| Unit cell angles | 90.00, 108.70, 90.00 |
Refinement procedure
| Resolution | 41.370 - 3.030 |
| R-factor | 0.3062 |
| Rwork | 0.303 |
| R-free | 0.33890 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | PDB entries 7M4O 1ubq 4q5e & 7M4M AlphaFold model |
| RMSD bond length | 0.002 |
| RMSD bond angle | 0.486 |
| Data reduction software | XDS (Nov 1, 2016 BUILT=20161205) |
| Data scaling software | Aimless (version 0.7.4) |
| Phasing software | PHASER (2.8.3) |
| Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 47.640 | 3.210 |
| High resolution limit [Å] | 3.030 | 3.030 |
| Rmerge | 0.111 | 0.979 |
| Number of reflections | 12690 | 1986 |
| <I/σ(I)> | 5.6 | 0.9 |
| Completeness [%] | 98.4 | |
| Redundancy | 3.4 | |
| CC(1/2) | 0.994 | 0.533 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7.9 | 293 | 2 M ammonium sulfate |






