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8DNN

Crystal structure of neutralizing antibody 80 in complex with SARS-CoV-2 receptor binding domain

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-B
Synchrotron siteAPS
Beamline23-ID-B
Temperature [K]80
Detector technologyPIXEL
Collection date2021-10-16
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.033167
Spacegroup nameP 21 21 21
Unit cell lengths85.110, 111.580, 187.080
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.910 - 3.120
R-factor0.1955
Rwork0.193
R-free0.25200
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7lm8
RMSD bond length0.004
RMSD bond angle0.626
Data reduction softwareXPREP
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]29.9103.231
High resolution limit [Å]3.1203.120
Number of reflections3239544891
<I/σ(I)>6.03
Completeness [%]99.899.97
Redundancy13.6
CC(1/2)0.9840.615
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.2M di-ammonium tartarate, 20% (w/v) polyethylene glycol 3350

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