8CZA
Crystal structure of the first bromodomain (BD1) of human BRDT bound to GXH-IV-075
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-08-09 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0332 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 94.801, 175.737, 143.071 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.400 - 2.960 |
R-factor | 0.2072 |
Rwork | 0.204 |
R-free | 0.26760 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4kcx |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.400 | 3.040 |
High resolution limit [Å] | 2.960 | 2.960 |
Rmeas | 0.255 | 2.230 |
Number of reflections | 24746 | 1835 |
<I/σ(I)> | 8.9 | 1.3 |
Completeness [%] | 97.9 | 99.9 |
Redundancy | 6.4 | 6.5 |
CC(1/2) | 0.995 | 0.373 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 291 | 0.2 M Lithium sulfate monohydrate, 0.1 M Tris pH 8.5, 25% w/v Polyethylene glycol 3,350 |