8C9O
Crystal structure of SARS-CoV-2 Mpro-S144A mutant in complex with 13b-K
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, DESY BEAMLINE P11 |
Synchrotron site | PETRA III, DESY |
Beamline | P11 |
Temperature [K] | 293 |
Detector technology | PIXEL |
Collection date | 2022-05-28 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1.003 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 67.766, 99.689, 103.307 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.310 - 1.690 |
Rwork | 0.198 |
R-free | 0.23440 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6y2e |
RMSD bond length | 0.009 |
RMSD bond angle | 1.654 |
Data reduction software | autoPROC |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.310 | 1.760 |
High resolution limit [Å] | 1.690 | 1.700 |
Rmerge | 3.380 | |
Number of reflections | 78872 | 7614 |
<I/σ(I)> | 13.71 | |
Completeness [%] | 99.9 | 99.7 |
Redundancy | 13.4 | |
CC(1/2) | 0.999 | 0.426 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 298 | Ethylene glycols, HEPES, PEG 500 MME, PEG 20000 |