8BQ7
Structure of the mouse 8-oxoguanine DNA Glycosylase mOGG1 in complex with ligand TH2829
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-06-10 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9762 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 80.733, 82.095, 169.487 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 72.993 - 2.600 |
Rwork | 0.255 |
R-free | 0.30690 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7pz1 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.653 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0352) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 72.993 | 2.720 |
High resolution limit [Å] | 2.600 | 2.600 |
Number of reflections | 35462 | 4247 |
<I/σ(I)> | 11.4 | |
Completeness [%] | 100.0 | |
Redundancy | 13.4 | |
CC(1/2) | 0.998 | 0.589 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 294 | 10 % w/v PEG4000, 20 % glycerol, 0.02 M monosaccharide, 0.1 M bicine/Trizma base pH 8.5 |