8A7I
Crystal structure of BRD9 bromodomain in complex with compound EA-89
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-02-04 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 36.083, 66.386, 55.883 |
Unit cell angles | 90.00, 105.83, 90.00 |
Refinement procedure
Resolution | 41.780 - 1.760 |
R-factor | 0.2023 |
Rwork | 0.201 |
R-free | 0.23660 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4yy6 |
RMSD bond length | 0.009 |
RMSD bond angle | 0.820 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | BUSTER (2.11.8 (8-JUN-2022)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 53.764 | 1.823 |
High resolution limit [Å] | 1.760 | 1.760 |
Rmerge | 0.020 | 0.236 |
Number of reflections | 21364 | 2507 |
<I/σ(I)> | 17.55 | 2.57 |
Completeness [%] | 84.5 | |
Redundancy | 1.9 | |
CC(1/2) | 1.000 | 0.914 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277.15 | 15% PEG 3350, 0.1M Succinic Acid |