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8TT8

Joint Xray/Neutron structure of Macrophage Migration Inhibitory Factor (MIF) Bound to 4-hydroxyphenylpyruvate at room temperature

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]293
Detector technologyPIXEL
Collection date2017-07-10
DetectorDECTRIS EIGER R 4M
Wavelength(s)1.54148
Spacegroup nameP 21 21 21
Unit cell lengths68.613, 69.231, 89.185
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution17.620 - 2.530
R-factor0.2214
Rwork0.219
R-free0.27050
Structure solution methodFOURIER SYNTHESIS
RMSD bond length0.098
RMSD bond angle1.570
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]54.6902.5901.780
High resolution limit [Å]1.7502.5001.750
Rmerge0.0860.3490.586
Rmeas0.1010.3980.649
Rpim0.0440.1810.310
Number of reflections436019642366
<I/σ(I)>10.42.22.6
Completeness [%]100.067100
Redundancy4.73.44.6
CC(1/2)0.9880.6790.770
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.4295Protein: 1 mM MIF, 10 mM deuterated HPP, 20 mM NaCl in 20 mM Tris (pH 7.4) mixed 1:1 with reservoir containing 2M (NH4)2SO4, 1% isopropanol in 100 mM Tris (pH 7.4).
1VAPOR DIFFUSION, SITTING DROP7.4295Protein: 1 mM MIF, 10 mM deuterated HPP, 20 mM NaCl in 20 mM Tris (pH 7.4) mixed 1:1 with reservoir containing 2M (NH4)2SO4, 1% isopropanol in 100 mM Tris (pH 7.4).

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