8TS0
Crystal Structure of human ASGR1 CRD (Carbohydrate Recognition Domain) bound to 8M24 Fab
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-08-26 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9999 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 38.911, 90.316, 167.805 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.047 - 1.700 |
R-factor | 0.1743 |
Rwork | 0.173 |
R-free | 0.20470 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.870 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.14rc1_3177) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.910 | 1.730 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.103 | 2.814 |
Rmeas | 0.107 | 2.923 |
Rpim | 0.030 | 0.789 |
Total number of observations | 863662 | 46748 |
Number of reflections | 66288 | 3439 |
<I/σ(I)> | 14.7 | 0.9 |
Completeness [%] | 100.0 | |
Redundancy | 13 | 13.6 |
CC(1/2) | 0.999 | 0.407 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 9 | 298 | 100mM SPG (succinic acid:sodium dihydrogen phosphate:glycine) buffer pH 9.0, 25% PEG1500, Cryo protectant: 20% glycerol |