8HNW
Crystal structure of HpaCas9-sgRNA surveillance complex bound to double-stranded DNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-01-31 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.979 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 158.867, 185.760, 160.880 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.620 - 3.410 |
R-factor | 0.2588 |
Rwork | 0.258 |
R-free | 0.28150 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 8hnt |
RMSD bond length | 0.003 |
RMSD bond angle | 0.614 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.460 |
High resolution limit [Å] | 3.400 | 3.400 |
Rmerge | 0.132 | 1.691 |
Number of reflections | 32947 | 1628 |
<I/σ(I)> | 16.64 | |
Completeness [%] | 100.0 | |
Redundancy | 7.2 | |
CC(1/2) | 0.990 | 0.866 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 289 | tris, sodium chloride, sodium acetate, lithium sulfate, PEG 10000 |