8EZG
Monobody 12D1 bound to KRAS(G12D)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 19-ID |
| Synchrotron site | APS |
| Beamline | 19-ID |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2022-09-24 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 0.97918 |
| Spacegroup name | P 64 2 2 |
| Unit cell lengths | 156.477, 156.477, 64.624 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 45.170 - 2.520 |
| R-factor | 0.173 |
| Rwork | 0.171 |
| R-free | 0.21310 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | PDB entries 7L0G & 5VPZ |
| RMSD bond length | 0.008 |
| RMSD bond angle | 0.936 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.20.1_4487: 000)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 2.560 |
| High resolution limit [Å] | 2.520 | 2.520 |
| Rmerge | 0.092 | 0.324 |
| Rmeas | 0.098 | 0.344 |
| Rpim | 0.033 | 0.113 |
| Number of reflections | 16221 | 798 |
| <I/σ(I)> | 20.3 | 7.4 |
| Completeness [%] | 99.9 | 99.9 |
| Redundancy | 8.7 | 9 |
| CC(1/2) | 0.986 | 0.973 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7 | 291 | 2.8 M sodium acetate trihydrate |






