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7ZSQ

human purine nucleoside phosphorylase in complex with JS-555

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.1
Synchrotron siteBESSY
Beamline14.1
Temperature [K]100
Detector technologyPIXEL
Collection date2021-07-23
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.918
Spacegroup nameP 21 21 21
Unit cell lengths57.070, 90.930, 143.070
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.380 - 1.770
R-factor0.1823
Rwork0.182
R-free0.21370
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1g2o
RMSD bond length0.011
RMSD bond angle1.694
Data reduction softwareXDS
Data scaling softwareXSCALE
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]48.38048.3801.880
High resolution limit [Å]1.7705.2801.770
Rmerge0.1610.0432.515
Rmeas0.1740.0472.710
Total number of observations976139
Number of reflections140249526822599
<I/σ(I)>8.3936.940.62
Completeness [%]99.999.899.6
Redundancy6.966.9277.187
CC(1/2)0.9970.9990.253
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP291.1530.00 % v/v Polyethylene glycol 400; 100 mM HEPES; pH 7.5; 200 mM Magnesium chloride; 1 mM TEW

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PDB entries from 2024-08-07

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