7Y1G
Crystal structure of human PRKACA complexed with DS01080522
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2016-06-21 |
Detector | RIGAKU RAXIS VII |
Wavelength(s) | 1.5418 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 92.221, 87.630, 113.476 |
Unit cell angles | 90.00, 106.72, 90.00 |
Refinement procedure
Resolution | 25.000 - 2.300 |
R-factor | 0.1881 |
Rwork | 0.185 |
R-free | 0.23690 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | in house structure of same protein |
RMSD bond length | 0.006 |
RMSD bond angle | 1.556 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.7) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.760 | 45.760 | 2.380 |
High resolution limit [Å] | 2.300 | 8.910 | 2.300 |
Rmerge | 0.103 | 0.029 | 0.833 |
Rmeas | 0.121 | 0.035 | 0.968 |
Rpim | 0.062 | 0.019 | 0.492 |
Total number of observations | 140987 | 2227 | 13859 |
Number of reflections | 37695 | 653 | 3657 |
<I/σ(I)> | 5.5 | 16.4 | 0.9 |
Completeness [%] | 98.0 | 94.5 | 97.2 |
Redundancy | 3.7 | 3.4 | 3.8 |
CC(1/2) | 0.993 | 0.981 | 0.640 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.4 | 293 | 25 mM Tris, pH 8.4/ 20% PEG3350/ 0.05 M Zn Acetate/ 25 mM Glycine |