7XPY
Crystal structure of USP7 in complex with its inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-12-08 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.97891 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 78.005, 80.170, 150.857 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.741 - 2.350 |
R-factor | 0.2261 |
Rwork | 0.224 |
R-free | 0.26580 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2ylm |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.920 | 2.430 |
High resolution limit [Å] | 2.350 | 2.350 |
Rmeas | 0.046 | 0.869 |
Number of reflections | 40115 | 3932 |
<I/σ(I)> | 19.5 | 2.3 |
Completeness [%] | 99.8 | 100 |
Redundancy | 5.4 | 5.6 |
CC(1/2) | 0.999 | 0.832 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277 | 2% v/v Tacsimate pH 7.0, 0.1 M Imidazole pH 7.0, 8% w/v Polyethylene glycol 3350, 5% v/v 2-Propanol |