7XL1
Crystal structure of chimeric 7D12-Vob nanobody at 1.65 Angstrom
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PHOTON FACTORY BEAMLINE BL-1A |
| Synchrotron site | Photon Factory |
| Beamline | BL-1A |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-03-16 |
| Detector | DECTRIS EIGER R 4M |
| Wavelength(s) | 1.000 |
| Spacegroup name | P 42 21 2 |
| Unit cell lengths | 68.580, 68.580, 103.660 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 35.440 - 1.650 |
| R-factor | 0.158 |
| Rwork | 0.156 |
| R-free | 0.20600 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 7xl0 |
| RMSD bond length | 0.007 |
| RMSD bond angle | 1.431 |
| Data reduction software | MOSFLM (7.2.2) |
| Data scaling software | SCALA (3.3.22) |
| Phasing software | PHASER (2.8.2) |
| Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 35.500 | 1.740 |
| High resolution limit [Å] | 1.650 | 1.650 |
| Rmerge | 0.108 | 0.963 |
| Rmeas | 0.327 | |
| Rpim | 0.038 | 0.327 |
| Number of reflections | 30042 | 4233 |
| <I/σ(I)> | 12 | 2.3 |
| Completeness [%] | 98.8 | 97.8 |
| Redundancy | 8.7 | 9.2 |
| CC(1/2) | 0.997 | 0.724 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.2 M sodium malonate pH 4.0 20% PEG 3,350 |






