7XHV
Crystal Structure of the NPAS4-ARNT heterodimer in complex with DNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-02-04 |
Detector | SIEMENS-NICOLET |
Wavelength(s) | 0.97846 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 72.846, 72.846, 272.741 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 31.074 - 3.996 |
R-factor | 0.2751 |
Rwork | 0.273 |
R-free | 0.33060 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4zpk |
Data reduction software | HKL-3000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 4.070 |
High resolution limit [Å] | 3.996 | 10.820 | 4.000 |
Rmerge | 0.111 | 0.066 | 0.813 |
Rmeas | 0.115 | 0.069 | 0.840 |
Rpim | 0.029 | 0.019 | 0.206 |
Number of reflections | 6850 | 418 | 338 |
<I/σ(I)> | 5.2 | ||
Completeness [%] | 99.9 | 99.3 | 100 |
Redundancy | 16.2 | 12.3 | 15.9 |
CC(1/2) | 0.998 | 0.926 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 8 | 289 | ammonium tartrate dibasic, PEG3350 |