7WMT
Crystal structure of small molecule 13 bound to human Nicotinamide N-methyltransferase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E+ SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2019-02-25 |
Detector | RIGAKU RAXIS VII |
Wavelength(s) | 1.54178 |
Spacegroup name | P 32 |
Unit cell lengths | 62.654, 62.654, 67.121 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 54.260 - 1.770 |
R-factor | 0.1567 |
Rwork | 0.155 |
R-free | 0.19090 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.020 |
RMSD bond angle | 2.122 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP (11.6.02) |
Refinement software | REFMAC (5.8.0218) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 54.260 | 50.000 | 1.830 |
High resolution limit [Å] | 1.770 | 3.810 | 1.770 |
Rmerge | 0.036 | 0.027 | 0.247 |
Rmeas | 0.040 | 0.030 | 0.278 |
Rpim | 0.017 | 0.013 | 0.126 |
Number of reflections | 28583 | 2878 | 2709 |
<I/σ(I)> | 28.1 | ||
Completeness [%] | 99.4 | 99.8 | 94.3 |
Redundancy | 5 | 5.2 | 4.8 |
CC(1/2) | 0.999 | 0.946 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | 0.04 M Potassium phosphate monobasic, 16 % w/v PEG 8000, 20 % v/v Glycerol |