7VDO
Crystal structure of KRED F147L/L153Q/Y190P variant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-06-06 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97913 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 127.610, 55.440, 128.950 |
Unit cell angles | 90.00, 103.94, 90.00 |
Refinement procedure
Resolution | 31.902 - 1.856 |
R-factor | 0.159038385072 |
Rwork | 0.158 |
R-free | 0.19811 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4rf2 |
RMSD bond length | 0.006 |
RMSD bond angle | 0.951 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 61.930 | 1.900 |
High resolution limit [Å] | 1.855 | 1.855 |
Rmerge | 0.069 | 0.504 |
Rmeas | 0.075 | 0.574 |
Rpim | 0.030 | 0.265 |
Number of reflections | 73460 | 5113 |
<I/σ(I)> | 15.4 | 2.7 |
Completeness [%] | 98.8 | 93.4 |
Redundancy | 6.2 | 4.4 |
CC(1/2) | 0.998 | 0.822 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 291 | 0.1 M Bis-Tris pH 6.5, 25% (w/v) PEG 3350, 0.2 M MgCl2 |