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7VDO

Crystal structure of KRED F147L/L153Q/Y190P variant

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U1
Synchrotron siteSSRF
BeamlineBL17U1
Temperature [K]100
Detector technologyPIXEL
Collection date2020-06-06
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97913
Spacegroup nameC 1 2 1
Unit cell lengths127.610, 55.440, 128.950
Unit cell angles90.00, 103.94, 90.00
Refinement procedure
Resolution31.902 - 1.856
R-factor0.159038385072
Rwork0.158
R-free0.19811
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4rf2
RMSD bond length0.006
RMSD bond angle0.951
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHENIX
Refinement softwarePHENIX (1.11.1_2575)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]61.9301.900
High resolution limit [Å]1.8551.855
Rmerge0.0690.504
Rmeas0.0750.574
Rpim0.0300.265
Number of reflections734605113
<I/σ(I)>15.42.7
Completeness [%]98.893.4
Redundancy6.24.4
CC(1/2)0.9980.822
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.52910.1 M Bis-Tris pH 6.5, 25% (w/v) PEG 3350, 0.2 M MgCl2

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PDB entries from 2024-11-06

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