7UL1
Crystal structure of SARS-CoV-2 RBD in complex with the neutralizing IGHV3-53-encoded antibody EH3 isolated from a nonvaccinated pediatric patient
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2021-10-23 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.979 |
Spacegroup name | P 21 2 21 |
Unit cell lengths | 86.691, 103.117, 112.344 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 35.000 | 35.000 | 2.740 |
High resolution limit [Å] | 2.650 | 5.700 | 2.650 |
Rmerge | 0.190 | 0.119 | 0.720 |
Rmeas | 0.206 | 0.130 | 0.782 |
Rpim | 0.079 | 0.052 | 0.301 |
Total number of observations | 197624 | ||
Number of reflections | 29750 | 3162 | 2938 |
<I/σ(I)> | 3.7 | ||
Completeness [%] | 99.4 | 99.1 | 99.8 |
Redundancy | 6.6 | 6.5 | 6.6 |
CC(1/2) | 0.983 | 0.772 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5 | 294 | 0.1M sodium citrate pH 5.0, 8% w/v PEG8000 |