7U8E
Crystal structure of antibody Ab246 in complex with SARS-CoV-2 receptor binding domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2020-06-26 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 194.797, 41.603, 98.991 |
Unit cell angles | 90.00, 107.03, 90.00 |
Refinement procedure
Resolution | 19.899 - 2.290 |
R-factor | 0.2062 |
Rwork | 0.204 |
R-free | 0.24750 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6h0e |
RMSD bond length | 0.004 |
RMSD bond angle | 0.677 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.380 |
High resolution limit [Å] | 2.290 | 2.290 |
Rmeas | 0.148 | |
Rpim | 0.080 | |
Number of reflections | 33571 | 3156 |
<I/σ(I)> | 9.78 | |
Completeness [%] | 96.3 | 91 |
Redundancy | 3.2 | |
CC(1/2) | 0.980 | 0.897 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 4.6 | 291 | 0.1 M Sodium acetate trihydrate pH 4.6, 2.0 M Ammonium sulfate |