7TZG
Structure of human LAG3 in complex with antibody single-chain variable fragment
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-10-27 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.033 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 78.436, 142.928, 158.169 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.620 - 3.710 |
R-factor | 0.2287 |
Rwork | 0.226 |
R-free | 0.27480 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6dsi |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.620 | 45.620 | 3.810 |
High resolution limit [Å] | 3.710 | 16.600 | 3.710 |
Rmerge | 0.195 | 0.042 | 1.156 |
Rmeas | 0.218 | 0.048 | 1.298 |
Total number of observations | 98804 | ||
Number of reflections | 19405 | 247 | 1394 |
<I/σ(I)> | 7.43 | 24.21 | 1.65 |
Completeness [%] | 99.8 | 94.3 | 99.5 |
Redundancy | 5.092 | 4.166 | 4.961 |
CC(1/2) | 0.994 | 0.999 | 0.501 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 1% Tacsimate at pH 5.0, 0.05 M sodium citrate tribasic dihydrate, pH 5.6 and 7% PEG3350 |