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7THA

Crystal structure of human transthyretin variant C10A/M13V

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2017-05-22
DetectorMAR scanner 345 mm plate
Wavelength(s)1.5418
Spacegroup nameP 21 2 21
Unit cell lengths42.602, 64.509, 85.919
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution32.870 - 1.750
R-factor0.1829
Rwork0.181
R-free0.21110
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4ydm
RMSD bond length0.011
RMSD bond angle1.670
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0238)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]42.9601.840
High resolution limit [Å]1.7501.750
Rpim0.0260.590
Number of reflections246073541
<I/σ(I)>17.31.6
Completeness [%]100.0
Redundancy7.7
CC(1/2)1.0000.730
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP298Crystals of TTR C10A/M13V were grown at 23 degrees C using sitting-drop vapor diffusion by mixing 0.2 microliters of 5 mg/mL protein in 50 mM Tris pH 7.8 and 0.2 microliters of a crystallization buffer consisting of 0.19M CaCl2, 5% (v/v) glycerol, 0.095M HEPES pH 7.5, and 26.6% (v/v) PEG 400. Crystals were frozen directly without additional cryo-protection by plunging in liquid nitrogen

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