7TA6
Trimer-to-Monomer Disruption of Tumor Necrosis Factor-alpha (TNF-alpha) by unnatural alpha/beta-peptide-1
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 23-ID-D |
| Synchrotron site | APS |
| Beamline | 23-ID-D |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-12-12 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 1.03323 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 143.774, 143.552, 76.888 |
| Unit cell angles | 90.00, 97.85, 90.00 |
Refinement procedure
| Resolution | 39.740 - 2.670 |
| R-factor | 0.2463 |
| Rwork | 0.245 |
| R-free | 0.27270 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1TNF_A |
| Data reduction software | XDS (Jan 31, 2020) |
| Data scaling software | Aimless (0.7.4) |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.19.2) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 101.110 | 101.110 | 2.820 |
| High resolution limit [Å] | 2.670 | 8.450 | 2.670 |
| Rmerge | 0.117 | 0.052 | 1.789 |
| Rmeas | 0.127 | 0.057 | 1.931 |
| Rpim | 0.048 | 0.022 | 0.724 |
| Total number of observations | 298842 | 8943 | 44479 |
| Number of reflections | 43735 | 1411 | 6348 |
| <I/σ(I)> | 9.5 | 25.8 | 1.1 |
| Completeness [%] | 100.0 | 99.7 | 100 |
| Redundancy | 6.8 | 6.3 | 7 |
| CC(1/2) | 0.998 | 0.998 | 0.428 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION | 8.5 | 292 | 0.8 M potassium sodium tartrate, 0.1 M Tris HCl pH 8.5, 4% ethylene glycol |






