Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

7SX5

Crystal structure of ligase I with nick duplexes containing mismatch A:C

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCHESS BEAMLINE 7B2
Synchrotron siteCHESS
Beamline7B2
Temperature [K]100
Detector technologyPIXEL
Collection date2021-04-28
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.9686
Spacegroup nameP 21 21 21
Unit cell lengths63.755, 116.407, 126.012
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.960 - 2.800
R-factor0.1772
Rwork0.175
R-free0.21190
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7sum
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.850
High resolution limit [Å]2.8002.800
Number of reflections366951273
<I/σ(I)>21.2
Completeness [%]99.9
Redundancy6.3
CC(1/2)0.9470.707
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.6293100 mM MES pH 6.6, 100 mM lithium acetate, 20% (w/v) polyethylene glycol PEG3350

240971

PDB entries from 2025-08-27

PDB statisticsPDBj update infoContact PDBjnumon