7STG
Consequences of HLA single chain trimer mutations on peptide presentation and binding affinity
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.1 |
Synchrotron site | ALS |
Beamline | 5.0.1 |
Temperature [K] | 93 |
Detector technology | PIXEL |
Collection date | 2021-08-13 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1 |
Spacegroup name | P 1 |
Unit cell lengths | 117.593, 118.088, 273.727 |
Unit cell angles | 102.44, 102.41, 89.88 |
Refinement procedure
Resolution | 48.860 - 2.700 |
R-factor | 0.2436 |
Rwork | 0.242 |
R-free | 0.27600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7srk |
RMSD bond length | 0.003 |
RMSD bond angle | 0.519 |
Refinement software | PHENIX (1.19.1_4122) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.800 |
High resolution limit [Å] | 2.700 | 2.700 |
Number of reflections | 362304 | 32198 |
<I/σ(I)> | 13.7 | |
Completeness [%] | 94.7 | |
Redundancy | 1.7 | |
CC(1/2) | 0.993 | 0.739 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 295 | 100 mM Tris, pH 8.0, 200 mM Li2SO4, 1.1 M AmSO4 |