7SD5
Crystallographic structure of neutralizing antibody 10-40 in complex with SARS-CoV-2 spike receptor binding domain
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 24-ID-E |
| Synchrotron site | APS |
| Beamline | 24-ID-E |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2021-07-18 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.979 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 75.756, 79.845, 118.864 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 59.440 - 1.530 |
| R-factor | 0.17773 |
| Rwork | 0.176 |
| R-free | 0.20625 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 7l5b |
| RMSD bond length | 0.013 |
| RMSD bond angle | 1.783 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHENIX |
| Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 59.440 | 1.530 |
| High resolution limit [Å] | 1.530 | 1.530 |
| Rmerge | 0.045 | |
| Number of reflections | 111889 | 22517 |
| <I/σ(I)> | 17.5 | |
| Completeness [%] | 97.1 | |
| Redundancy | 7.4 | |
| CC(1/2) | 1.000 | 0.256 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 310 | 0.2 M potassium thiocyanate, 0.1 M sodium acetate, pH 5.5, 8% PEG550 MME, 8% PEG20000 |






