7R3A
Crystal structure of S-adenosyl-L-homocysteine hydrolase from Methanococcus maripaludis in complex with inosine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-03-13 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 65.775, 328.867, 85.094 |
Unit cell angles | 90.00, 107.23, 90.00 |
Refinement procedure
Resolution | 47.860 - 2.530 |
R-factor | 0.1909 |
Rwork | 0.188 |
R-free | 0.24280 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1v8b |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.1_4122) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.760 | 2.670 |
High resolution limit [Å] | 2.530 | 2.530 |
Rmerge | 0.190 | |
Number of reflections | 111512 | 16348 |
<I/σ(I)> | 5.9 | |
Completeness [%] | 97.5 | |
Redundancy | 3.6 | |
CC(1/2) | 0.980 | 0.400 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 295 | 28% (w/v) PEG 3350,100 mM MMT buffer pH 8.0 |