7QQG
Crystal structure of MYORG bound to 1-deoxygalactonojirimycin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-02-20 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 1 |
Unit cell lengths | 73.113, 78.882, 176.221 |
Unit cell angles | 80.78, 80.21, 62.64 |
Refinement procedure
Resolution | 69.750 - 2.430 |
Rwork | 0.224 |
R-free | 0.24970 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2f2h |
RMSD bond length | 0.006 |
RMSD bond angle | 1.428 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 69.750 | 69.750 | 2.470 |
High resolution limit [Å] | 2.430 | 13.310 | 2.430 |
Rmerge | 0.073 | 0.023 | 0.724 |
Rmeas | 0.103 | 0.032 | 1.024 |
Rpim | 0.073 | 0.023 | 0.724 |
Number of reflections | 127078 | 776 | 6328 |
<I/σ(I)> | 8.4 | 24.4 | 1.4 |
Completeness [%] | 98.3 | ||
Redundancy | 3.5 | 3.6 | 3.7 |
CC(1/2) | 0.995 | 0.998 | 0.555 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 291 | 100 mM HEPES pH 7.0, 10% PEG MME5000, 5% tasimate pH 7.0 |