7QDQ
Crystal Structure of HDM2 in complex with Caylin-1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-06-28 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 41.641, 43.675, 53.351 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 33.800 - 1.260 |
R-factor | 0.1848 |
Rwork | 0.182 |
R-free | 0.21620 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5c5a |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 43.670 | 43.670 | 1.280 |
High resolution limit [Å] | 1.260 | 6.920 | 1.260 |
Rmerge | 0.117 | 0.100 | 1.539 |
Rmeas | 0.123 | 0.105 | 1.657 |
Rpim | 0.036 | 0.031 | 0.593 |
Total number of observations | 256192 | 2219 | 6409 |
Number of reflections | 26125 | 206 | 904 |
<I/σ(I)> | 13.2 | 24.6 | 2.5 |
Completeness [%] | 97.7 | 99.8 | 69.6 |
Redundancy | 9.8 | 10.8 | 7.1 |
CC(1/2) | 0.997 | 0.995 | 0.575 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 293 | 2.8M Ammonium Sulfate, 100mM MES |