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7PPH

CRYSTAL STRUCTURE OF NAMPT IN COMPLEX WITH Compound 10

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.1
Synchrotron siteBESSY
Beamline14.1
Temperature [K]100
Detector technologyPIXEL
Collection date2016-11-30
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.91841
Spacegroup nameP 1 21 1
Unit cell lengths61.122, 105.778, 83.176
Unit cell angles90.00, 96.51, 90.00
Refinement procedure
Resolution46.530 - 1.740
R-factor0.1954
Rwork0.195
R-free0.22900
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2gvj
RMSD bond length0.013
RMSD bond angle1.729
Data reduction softwareXDS (VERSION Nov 1, 2016)
Data scaling softwarepointless (1.10.13)
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.5301.850
High resolution limit [Å]1.7401.740
Rmeas0.1970.914
Number of reflections10411115703
<I/σ(I)>6.661.53
Completeness [%]96.890.6
Redundancy4.194.17
CC(1/2)0.9910.409
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.62931 microliter of protein mixed with 1 microliter of reservoir buffer (27-31% PEG 3350 (w/v), 200 mM NaCl, 100 mM sodium dihydrogen phosphate pH 7.6) incubated for 5 min, then streak seeded (with crystals obtained previously under identical conditions). Ligand added prior to crystallization (2 MILLIMOLAR FROM 100 MILLIMOLAR STOCK IN DMSO) and incubated for 1.5 h at 277 K. CRYO BUFFER consisted of RESERVOIR supplemented WITH 2 MILLIMOLAR INHIBITOR AND 10% GLYCEROL.

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