7PNL
Complex between monomolecular human telomeric G-quadruplex and a sulfonamide derivative of the natural alkaloid Berberine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ELETTRA BEAMLINE 11.2C |
Synchrotron site | ELETTRA |
Beamline | 11.2C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-09-01 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0000 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 36.842, 72.717, 27.028 |
Unit cell angles | 90.00, 90.10, 90.00 |
Refinement procedure
Resolution | 36.360 - 1.830 |
R-factor | 0.2092 |
Rwork | 0.204 |
R-free | 0.32130 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6h5r |
RMSD bond length | 0.008 |
RMSD bond angle | 2.138 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 36.360 | 1.940 |
High resolution limit [Å] | 1.830 | 1.830 |
Rmerge | 0.038 | 0.649 |
Rmeas | 0.046 | 0.779 |
Number of reflections | 6268 | 1996 |
<I/σ(I)> | 13.73 | 1.5 |
Completeness [%] | 98.8 | 99.2 |
Redundancy | 3.27 | 3.2 |
CC(1/2) | 0.998 | 0.891 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 296 | KCl, potassium Cacodylate, MPD |