7PK4
Tick salivary cystatin Ricistatin in complex with cathepsin V
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-02-02 |
Detector | DECTRIS PILATUS 300K |
Wavelength(s) | 1.541870 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 117.488, 45.322, 58.520 |
Unit cell angles | 90.00, 96.89, 90.00 |
Refinement procedure
Resolution | 43.870 - 1.920 |
R-factor | 0.1878 |
Rwork | 0.186 |
R-free | 0.22610 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3kfq |
RMSD bond length | 0.009 |
RMSD bond angle | 1.462 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 43.910 | 43.870 | 1.970 |
High resolution limit [Å] | 1.920 | 9.010 | 1.920 |
Rmerge | 0.132 | 0.043 | 1.070 |
Rmeas | 0.160 | 0.052 | 1.362 |
Rpim | 0.090 | 0.030 | 0.828 |
Total number of observations | 775 | 3372 | |
Number of reflections | 23406 | 245 | 1504 |
<I/σ(I)> | 6.5 | 22.1 | 0.8 |
Completeness [%] | 99.2 | 98.8 | 94 |
Redundancy | 3.1 | 3.2 | 2.2 |
CC(1/2) | 0.991 | 0.985 | 0.320 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.5 | 291.15 | 0.07 M Ammonium acetate 4.5 18.9% w/v PEG 10,000 |