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7PHU

PfRH5 bound to monoclonal antibody R5.015 and R5.016 Fab fragments

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2017-07-31
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.97949
Spacegroup nameC 2 2 21
Unit cell lengths97.740, 163.300, 176.820
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.790 - 2.530
R-factor0.2379
Rwork0.236
R-free0.27590
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4u0r
RMSD bond length0.009
RMSD bond angle1.040
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwareBUSTER (2.10.4 (24-FEB-2021))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.2202.570
High resolution limit [Å]2.5302.530
Number of reflections31607416521
<I/σ(I)>13.1
Completeness [%]99.6
Redundancy6.7
CC(1/2)0.9990.575
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2910.2 M sodium formate, 0.1 M bis-tris propane pH 6.5, 20 % PEG 3350 with an additive containing 0.08 % w/v Ellipticine, 0.20 % w/v Protamine sulfate salt, 0.20 % w/v D-(+)-Trehalose dihydrate, 0.20 % w/v 6-Phosphogluconic acid trisodium salt, 0.20 % w/v D-(+)-Glucose, 0.02 M HEPES sodium pH 6.8

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PDB entries from 2024-07-10

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