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7PD2

Crystal structure of the substrate-free radical SAM tyrosine lyase ThiH (2-iminoacetate synthase) from Thermosinus carboxydivorans

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSOLEIL BEAMLINE PROXIMA 2
Synchrotron siteSOLEIL
BeamlinePROXIMA 2
Temperature [K]100
Detector technologyPIXEL
Collection date2020-03-14
DetectorDECTRIS EIGER X 9M
Wavelength(s)1.000
Spacegroup nameC 1 2 1
Unit cell lengths175.090, 49.330, 85.210
Unit cell angles90.00, 96.91, 90.00
Refinement procedure
Resolution47.460 - 1.990
R-factor0.2318
Rwork0.230
R-free0.26880
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7pd1
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHENIX
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.4602.040
High resolution limit [Å]1.9901.990
Number of reflections946096300
<I/σ(I)>6.11
Completeness [%]97.0
Redundancy6.1
CC(1/2)0.230
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2931.4-1.6 M (NH4)2SO4, 100 mM MES buffer pH 6.5, 15% dioxane

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PDB entries from 2024-05-15

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