7OUN
Structure of human PD-L1 in complex with macrocyclic inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-02-18 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9184 |
Spacegroup name | P 2 3 |
Unit cell lengths | 86.470, 86.470, 86.470 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 61.220 - 1.900 |
R-factor | 0.2331 |
Rwork | 0.232 |
R-free | 0.24650 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5o45 |
RMSD bond length | 0.016 |
RMSD bond angle | 2.262 |
Data reduction software | iMOSFLM |
Data scaling software | SCALA (3.3.22) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0257) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 86.470 | 61.143 | 2.000 |
High resolution limit [Å] | 1.663 | 6.010 | 1.900 |
Rmerge | 0.040 | 1.576 | |
Rmeas | 0.092 | 0.041 | 1.605 |
Rpim | 0.017 | 0.008 | 0.301 |
Total number of observations | 480286 | 16718 | 70607 |
Number of reflections | 17309 | 612 | 2508 |
<I/σ(I)> | 18.1 | 53.4 | 2.6 |
Completeness [%] | 100.0 | 99.9 | 100 |
Redundancy | 27.7 | 27.3 | 28.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.24 | 298 | 0.1M sodium citrate 1.95M ammonium sulphate |