7OP9
Purine nucleoside phosphorylase(DeoD-type) from H. pylori with 2,6-dichloropurine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ELETTRA BEAMLINE 5.2R |
Synchrotron site | ELETTRA |
Beamline | 5.2R |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-01-30 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.00 |
Spacegroup name | P 1 |
Unit cell lengths | 93.419, 93.428, 95.459 |
Unit cell angles | 81.91, 79.35, 60.09 |
Refinement procedure
Resolution | 42.590 - 1.500 |
R-factor | 0.1734 |
Rwork | 0.173 |
R-free | 0.19600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6f4x |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX (1.19.2) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.831 | 46.831 | 1.590 |
High resolution limit [Å] | 1.500 | 4.480 | 1.500 |
Rmerge | 0.061 | 0.038 | 0.343 |
Rmeas | 0.087 | 0.054 | 0.485 |
Number of reflections | 773378 | 29614 | 117742 |
<I/σ(I)> | 6.59 | 17.06 | 1.39 |
Completeness [%] | 87.8 | 89.7 | 82.6 |
Redundancy | 2.6 | ||
CC(1/2) | 0.994 | 0.992 | 0.792 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 294.15 | 0.2 M imidazole pH 7,0, PPG 400 |