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7NZ9

Crystal structure of mouse ADAT2/ADAT3 tRNA deamination complex V128L mutant

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06DA
Synchrotron siteSLS
BeamlineX06DA
Temperature [K]100
Detector technologyPIXEL
Collection date2019-11-23
DetectorDECTRIS PILATUS 2M-F
Wavelength(s)1.0
Spacegroup nameP 2 21 21
Unit cell lengths51.976, 106.814, 129.668
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.380 - 1.990
R-factor0.1904
Rwork0.189
R-free0.21780
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3dh1
RMSD bond length0.007
RMSD bond angle0.857
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHENIX
Refinement softwarePHENIX (1.19rc4_4035)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.110
High resolution limit [Å]1.9901.990
Rmerge0.1362.440
Number of reflections500477853
<I/σ(I)>15.151.05
Completeness [%]99.8
Redundancy13.2
CC(1/2)0.9990.385
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29318% (W/V) PEG3350, 0.1 M Bis-Tris Propane pH 7.5 and 0.2 M NaBr

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