7NE6
Human TET2 in complex with unfavourable DNA substrate.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-04-27 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.976 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 47.858, 87.943, 261.988 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.970 - 2.300 |
R-factor | 0.1967 |
Rwork | 0.195 |
R-free | 0.22700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4nm6 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.571 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.970 | 2.380 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.117 | 0.846 |
Rmeas | 0.126 | 0.940 |
Rpim | 0.045 | 0.394 |
Number of reflections | 24979 | 2337 |
<I/σ(I)> | 13.1 | 1.6 |
Completeness [%] | 99.2 | 93.3 |
Redundancy | 7.6 | 5.2 |
CC(1/2) | 0.997 | 0.606 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.3 | 278 | 0.1M MES pH=6.3, 23% PEG2000MME |