7MYM
Crystal structure of Escherichia coli dihydrofolate reductase in complex with TRIMETHOPRIM and NADPH
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-1 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-08-21 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.9201 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 65.470, 113.397, 216.578 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 56.760 - 3.040 |
R-factor | 0.2181 |
Rwork | 0.215 |
R-free | 0.28230 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4psy |
RMSD bond length | 0.006 |
RMSD bond angle | 1.474 |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.7.4) |
Phasing software | MrBUMP |
Refinement software | REFMAC (7.1.001) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 56.760 | 3.250 |
High resolution limit [Å] | 3.040 | 3.040 |
Rmerge | 0.289 | 0.863 |
Rmeas | 0.318 | 0.966 |
Rpim | 0.127 | 0.416 |
Number of reflections | 15680 | 16148 |
<I/σ(I)> | 3.9 | 1.9 |
Completeness [%] | 98.7 | 98.1 |
Redundancy | 6 | 5.8 |
CC(1/2) | 0.940 | 0.345 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277.15 | 18% to 20% PEG4000 or 8000, 0.2M ammonium sulfate and 2mM DTT. |