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7MVS

DNA gyrase complexed with uncleaved DNA and Compound 7 to 2.6A resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]77
Detector technologyPIXEL
Collection date2020-11-30
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.54
Spacegroup nameP 61
Unit cell lengths93.017, 93.017, 406.663
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution23.743 - 2.601
R-factor0.19732038353
Rwork0.196
R-free0.25172
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2xcs
RMSD bond length0.003
RMSD bond angle0.507
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX (1.11.1_2575)
Refinement softwarePHENIX (1.11.1_2575)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]23.7432.694
High resolution limit [Å]2.6012.601
Rmerge0.220
Rmeas0.239
Rpim0.0930.660
Number of reflections600225472
<I/σ(I)>9.2
Completeness [%]98.990.81
Redundancy6.1
CC(1/2)0.9970.389
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.2298motherliquor: 80mM Bis-Tris, pH=6.2, 15.33% PEG 5000MME protein: 50mM HEPES, pH=7.5 1.2uL motherliquor : 0.8uL protein streaked with existing seed stock

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PDB entries from 2024-08-07

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