7MVS
DNA gyrase complexed with uncleaved DNA and Compound 7 to 2.6A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 77 |
Detector technology | PIXEL |
Collection date | 2020-11-30 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.54 |
Spacegroup name | P 61 |
Unit cell lengths | 93.017, 93.017, 406.663 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 23.743 - 2.601 |
R-factor | 0.19732038353 |
Rwork | 0.196 |
R-free | 0.25172 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2xcs |
RMSD bond length | 0.003 |
RMSD bond angle | 0.507 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX (1.11.1_2575) |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 23.743 | 2.694 |
High resolution limit [Å] | 2.601 | 2.601 |
Rmerge | 0.220 | |
Rmeas | 0.239 | |
Rpim | 0.093 | 0.660 |
Number of reflections | 60022 | 5472 |
<I/σ(I)> | 9.2 | |
Completeness [%] | 98.9 | 90.81 |
Redundancy | 6.1 | |
CC(1/2) | 0.997 | 0.389 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.2 | 298 | motherliquor: 80mM Bis-Tris, pH=6.2, 15.33% PEG 5000MME protein: 50mM HEPES, pH=7.5 1.2uL motherliquor : 0.8uL protein streaked with existing seed stock |