7M5U
Crystal structure of human MPP8 chromodomain in complex with peptidomimetic ligand UNC5246
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 22-ID |
| Synchrotron site | APS |
| Beamline | 22-ID |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2018-10-23 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 1. |
| Spacegroup name | P 63 2 2 |
| Unit cell lengths | 87.123, 87.123, 57.802 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 34.788 - 2.020 |
| R-factor | 0.2164 |
| Rwork | 0.216 |
| R-free | 0.22830 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3lwe |
| RMSD bond length | 0.008 |
| RMSD bond angle | 0.995 |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | REFMAC (5) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 75.450 | 2.070 |
| High resolution limit [Å] | 2.020 | 2.020 |
| Rmerge | 0.044 | 1.661 |
| Rpim | 0.017 | 0.628 |
| Number of reflections | 8912 | 637 |
| <I/σ(I)> | 28.78 | 1.7 |
| Completeness [%] | 99.8 | 100 |
| Redundancy | 13.8 | 14.5 |
| CC(1/2) | 1.000 | 0.656 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | MICROBATCH | 5.6 | 293 | 100 mM sodium citrate tribasic dihydrate pH 5.6, 100 mM potassium sodium tartrate tetrahydrate, 2.0 M AmSO4 |






