7M40
Discovery of small molecule antagonists of human Retinoblastoma Binding Protein 4 (RBBP4)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-10-19 |
Detector | DECTRIS PILATUS3 X 6M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 75.820, 59.857, 102.011 |
Unit cell angles | 90.00, 93.73, 90.00 |
Refinement procedure
Resolution | 46.990 - 1.880 |
R-factor | 0.184 |
Rwork | 0.184 |
R-free | 0.23570 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6bw3 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.380 |
Data reduction software | HKL-3000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.910 |
High resolution limit [Å] | 1.880 | 5.100 | 1.880 |
Rmerge | 0.065 | 0.037 | 0.735 |
Rmeas | 0.071 | 0.041 | 0.815 |
Rpim | 0.030 | 0.017 | 0.343 |
Total number of observations | 401380 | ||
Number of reflections | 73841 | 3844 | 3484 |
<I/σ(I)> | 5.5 | ||
Completeness [%] | 98.0 | 98.6 | 93.8 |
Redundancy | 5.4 | 5.5 | 4.9 |
CC(1/2) | 0.998 | 0.869 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 291 | 23% PEG3350, 0.2N ammonium acetate, 0.1M Bis-tris pH5.5 |