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7M1V

Structure of Zika virus NS2b-NS3 protease mutant binding the compound NSC86314 in the super-open conformation

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL14-1
Synchrotron siteSSRL
BeamlineBL14-1
Temperature [K]100
Detector technologyPIXEL
Collection date2020-01-22
DetectorDECTRIS PILATUS 12M
Wavelength(s)1.19499
Spacegroup nameP 1
Unit cell lengths40.810, 42.637, 46.296
Unit cell angles98.88, 92.11, 90.41
Refinement procedure
Resolution33.680 - 1.600
Rwork0.160
R-free0.18900
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6um3
RMSD bond length0.015
RMSD bond angle1.841
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0257)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]33.6801.630
High resolution limit [Å]1.6001.600
Rmerge0.0230.076
Rmeas0.029
Number of reflections382261474
<I/σ(I)>25.18.2
Completeness [%]93.972.9
Redundancy2.62.2
CC(1/2)0.9960.992
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.2 ul of 0.3 mM protein and 0.4 mM of the compound NSC83614 in 100 mM NaCl, 20 mM Tris-Cl buffer (pH 8.0), was mixed with 0.2 ul of the well solution.

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