7LPX
Crystal Structure of HIV-1 RT in Complex with NBD-14270
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CHESS BEAMLINE F1 |
Synchrotron site | CHESS |
Beamline | F1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-02-13 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.96868 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 161.597, 73.065, 107.397 |
Unit cell angles | 90.00, 100.11, 90.00 |
Refinement procedure
Resolution | 30.310 - 2.450 |
R-factor | 0.2165 |
Rwork | 0.215 |
R-free | 0.25040 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4g1q |
RMSD bond length | 0.006 |
RMSD bond angle | 0.970 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (dev_3051) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.310 | 2.490 |
High resolution limit [Å] | 2.448 | 2.448 |
Rmerge | 0.067 | 0.660 |
Rmeas | 0.073 | 0.790 |
Rpim | 0.030 | 0.420 |
Number of reflections | 45373 | 2165 |
<I/σ(I)> | 23.6 | 1.6 |
Completeness [%] | 99.5 | 96.7 |
Redundancy | 5.5 | 3.1 |
CC(1/2) | 0.996 | 0.242 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.6 | 277 | 10% PEG 8,000, 4% PEG 400, 100 mM imidazole pH 6.6,10 mM spermine, 15 mM MgSO4,100 mM (NH4)2SO4, and 5 mM tris(2-carboxyethyl)phosphine(TCEP) |