7LOT
Human PPAR Gamma LBD in Complex with Tetrazole Compound N-{3-[(4-methylbenzyl)oxy]benzyl}-2H-tetrazol-5-amine.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | LNLS BEAMLINE W01B-MX2 |
Synchrotron site | LNLS |
Beamline | W01B-MX2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-10-11 |
Detector | MAR CCD 130 mm |
Wavelength(s) | 1.459 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 92.791, 62.142, 118.277 |
Unit cell angles | 90.00, 101.95, 90.00 |
Refinement procedure
Resolution | 45.390 - 2.290 |
R-factor | 0.2051 |
Rwork | 0.203 |
R-free | 0.25920 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3sz1 |
RMSD bond length | 0.014 |
RMSD bond angle | 1.451 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.050 | 2.370 |
High resolution limit [Å] | 2.290 | 2.290 |
Rmerge | 0.040 | 0.576 |
Rmeas | 0.047 | 0.680 |
Rpim | 0.025 | 0.358 |
Number of reflections | 27930 | 2694 |
<I/σ(I)> | 10.4 | 1.8 |
Completeness [%] | 93.9 | 92.9 |
Redundancy | 3.5 | 3.5 |
CC(1/2) | 0.999 | 0.874 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 291 | 100 mM HEPES, pH 7.0 and 0.85 M Sodium Citrate |