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7LLF

SARS-CoV-2 papain-like protease (PLpro) bound to inhibitor XR8-83

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-D
Synchrotron siteAPS
Beamline21-ID-D
Temperature [K]100
Detector technologyPIXEL
Collection date2020-11-12
DetectorDECTRIS EIGER X 9M
Wavelength(s)1.1271
Spacegroup nameP 1 21 1
Unit cell lengths46.713, 147.365, 60.277
Unit cell angles90.00, 99.72, 90.00
Refinement procedure
Resolution46.290 - 2.300
R-factor0.2196
Rwork0.217
R-free0.25980
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7jrn
RMSD bond length0.005
RMSD bond angle1.322
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.2902.380
High resolution limit [Å]2.3002.300
Rmerge0.164
Rmeas0.196
Rpim0.106
Number of reflections338512626
<I/σ(I)>50.5
Completeness [%]95.176.1
Redundancy3.32.3
CC(1/2)0.9880.148
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.52890.1 M MIB buffer pH 6.5, 0.2M (NH4)2SO4, 13-16% PEG 3350, 20% glycerol

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