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7LIU

DDX3X bound to ATP analog and remodeled RNA:DNA hybrid

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]200
Detector technologyCCD
Collection date2016-08-09
DetectorRAYONIX MX300-HS
Wavelength(s)1.0
Spacegroup nameP 32 2 1
Unit cell lengths114.476, 114.476, 281.793
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution40.540 - 3.001
R-factor0.2112
Rwork0.210
R-free0.24120
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4pxa
RMSD bond length0.008
RMSD bond angle1.083
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.12_2829)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0003.110
High resolution limit [Å]3.0003.000
Rmeas0.1210.964
Rpim0.0440.379
Number of reflections435934265
<I/σ(I)>20.71.6
Completeness [%]99.799.7
Redundancy76.2
CC(1/2)0.641
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.52910.1 M HEPEs pH 7.5, 16% PEG 3350, 0.1 M Li3Citrate, 0.1 M Na3Citrate, 2% benzamidine-HCl, 5 mM ADP-BeF3

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