7LFS
Crystal structure of the epidermal growth factor receptor extracellular region with A265V mutation in complex with epiregulin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-02-14 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.03318 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 77.974, 201.331, 92.148 |
Unit cell angles | 90.00, 99.04, 90.00 |
Refinement procedure
Resolution | 44.380 - 3.500 |
R-factor | 0.2688 |
Rwork | 0.266 |
R-free | 0.31480 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5wb7 |
Data reduction software | XDS (20200417) |
Data scaling software | SCALA (3.3.22) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (dev_3915) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 100.666 | 48.063 | 3.690 |
High resolution limit [Å] | 3.500 | 11.070 | 3.500 |
Rmerge | 0.075 | 0.028 | 1.202 |
Rmeas | 0.089 | 0.033 | 1.416 |
Rpim | 0.048 | 0.018 | 0.743 |
Total number of observations | 3677 | 17882 | |
Number of reflections | 35094 | 1096 | 5029 |
<I/σ(I)> | 8.4 | 37.3 | 1.1 |
Completeness [%] | 99.2 | 95.2 | 97.4 |
Redundancy | 3.5 | 3.4 | 3.6 |
CC(1/2) | 0.999 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293.15 | 8 mg/ml protein, 1% w/v tryptone, 1 mM sodium azide, 50 mM HEPES (pH 7.0), 20% PEG3350 |