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7LB4

Crystal structure of the second bromodomain (BD2) of human BRD3 bound to bromosporine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2019-08-06
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.000
Spacegroup nameP 1 21 1
Unit cell lengths40.062, 47.638, 64.728
Unit cell angles90.00, 107.84, 90.00
Refinement procedure
Resolution38.135 - 2.004
R-factor0.182
Rwork0.178
R-free0.22910
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7l9l
Data reduction softwareXDS
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (1.15.2_3472)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]100.000100.0002.030
High resolution limit [Å]2.0005.4302.000
Rmerge0.0790.0430.441
Rmeas0.0920.0510.524
Rpim0.0480.0270.280
Total number of observations56172
Number of reflections15413830697
<I/σ(I)>8.9
Completeness [%]97.899.693.8
Redundancy3.63.43.2
CC(1/2)0.9970.863
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2910.1 M HEPES pH 7.5, 10 % w/v Polyethylene glycol 6,000, 5 % v/v (+/-)-2-Methyl-2,4-pentanediol

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