7LAH
Crystal structure of the first bromodomain (BD1) of human BRD2 bound to bromosporine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-03-27 |
Detector | RIGAKU SATURN 944+ |
Wavelength(s) | 1.5418 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 55.870, 80.670, 47.680 |
Unit cell angles | 90.00, 137.53, 90.00 |
Refinement procedure
Resolution | 40.606 - 1.600 |
R-factor | 0.1815 |
Rwork | 0.180 |
R-free | 0.20560 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7l9g |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 40.606 | 40.606 | 1.640 |
High resolution limit [Å] | 1.600 | 7.160 | 1.600 |
Rmerge | 0.023 | 0.020 | 0.344 |
Rmeas | 0.029 | 0.023 | 0.487 |
Total number of observations | 36983 | ||
Number of reflections | 18289 | 210 | 1288 |
<I/σ(I)> | 18.55 | 55.86 | 1.51 |
Completeness [%] | 95.9 | 90.1 | 91.3 |
Redundancy | 2.022 | 3.371 | 1.576 |
CC(1/2) | 0.999 | 0.999 | 0.789 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2 M Trimethylamine N-oxide dihydrate, 0.1 M Tris pH 8.5, 20 % w/v Polyethylene glycol monomethyl ether 2,000 |