Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7KR4

Human DNA Ligase 1(E346A/E592A) Bound to a nicked DNA substrate control duplex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2020-02-12
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.0000
Spacegroup nameP 21 21 21
Unit cell lengths72.374, 96.556, 114.997
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution37.916 - 2.200
R-factor0.1648
Rwork0.162
R-free0.21530
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6p09
RMSD bond length0.012
RMSD bond angle1.162
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.10.1_2155)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.240
High resolution limit [Å]2.2002.200
Number of reflections426312078
<I/σ(I)>15.7
Completeness [%]99.7
Redundancy6.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6293100 mM MES, 100 mM lithium acetate, 12% (w/v) polyethylene glycol 3350

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon